Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Gm18856-201ENSMUST00000178096 1374 ntBASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Ddx54Q8K4L0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Gm15467-201ENSMUST00000120582 445 ntBASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 AC153794.1-201ENSMUST00000169148 126 ntBASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Ddx54Q8K4L0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Gm23935-201ENSMUST00000102303 57 ntBASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Gm24270-201ENSMUST00000102326 57 ntBASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Gm24245-201ENSMUST00000157318 57 ntBASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Gm27867-201ENSMUST00000184778 125 ntBASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx54Q8K4L0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx54Q8K4L0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Gm10576-201ENSMUST00000191927 825 ntBASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Golph3-205ENSMUST00000228671 2842 ntBASIC22.53■■□□□ 1.2
Ddx54Q8K4L0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Gm32996-201ENSMUST00000199828 1447 ntBASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms