Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scara5Q8K299 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Scara5Q8K299 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.24■□□□□ 0.35
Scara5Q8K299 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.24■□□□□ 0.35
Scara5Q8K299 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scara5Q8K299 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.24■□□□□ 0.35
Scara5Q8K299 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.24■□□□□ 0.35
Scara5Q8K299 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scara5Q8K299 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scara5Q8K299 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scara5Q8K299 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scara5Q8K299 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scara5Q8K299 Gm37025-201ENSMUST00000195159 829 ntBASIC17.23■□□□□ 0.35
Scara5Q8K299 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.23■□□□□ 0.35
Scara5Q8K299 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scara5Q8K299 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scara5Q8K299 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Scara5Q8K299 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scara5Q8K299 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.23■□□□□ 0.35
Scara5Q8K299 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Scara5Q8K299 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.22■□□□□ 0.35
Scara5Q8K299 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scara5Q8K299 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Scara5Q8K299 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.22■□□□□ 0.35
Scara5Q8K299 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.22■□□□□ 0.35
Scara5Q8K299 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.22■□□□□ 0.35
Scara5Q8K299 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scara5Q8K299 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scara5Q8K299 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scara5Q8K299 Gm6623-201ENSMUST00000173570 544 ntBASIC17.21■□□□□ 0.35
Scara5Q8K299 Gm43514-201ENSMUST00000198852 424 ntBASIC17.21■□□□□ 0.35
Scara5Q8K299 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scara5Q8K299 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scara5Q8K299 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Scara5Q8K299 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.2■□□□□ 0.34
Scara5Q8K299 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.2■□□□□ 0.34
Scara5Q8K299 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.2■□□□□ 0.34
Scara5Q8K299 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Gm10566-201ENSMUST00000086739 996 ntBASIC17.2■□□□□ 0.34
Scara5Q8K299 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.2■□□□□ 0.34
Scara5Q8K299 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Scara5Q8K299 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scara5Q8K299 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms