Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.91■□□□□ 0.78
Rtn1Q8K0T0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Gm7638-201ENSMUST00000121348 967 ntBASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn1Q8K0T0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn1Q8K0T0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Gm17661-201ENSMUST00000170317 270 ntBASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Gm37055-201ENSMUST00000191866 133 ntBASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn1Q8K0T0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Gm5417-201ENSMUST00000079706 384 ntBASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rtn1Q8K0T0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Gm9731-201ENSMUST00000209480 747 ntBASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn1Q8K0T0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms