Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Gm27275-201ENSMUST00000184318 272 ntBASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgcs1Q8JZK9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgcs1Q8JZK9 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgcs1Q8JZK9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgcs1Q8JZK9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hmgcs1Q8JZK9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgcs1Q8JZK9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms