Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.37■□□□□ 0.37
Clip4Q8CI96 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.37■□□□□ 0.37
Clip4Q8CI96 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.37■□□□□ 0.37
Clip4Q8CI96 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.36■□□□□ 0.37
Clip4Q8CI96 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip4Q8CI96 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Gm15375-201ENSMUST00000119510 849 ntBASIC17.35■□□□□ 0.37
Clip4Q8CI96 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.35■□□□□ 0.37
Clip4Q8CI96 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip4Q8CI96 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clip4Q8CI96 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Gm8969-201ENSMUST00000199694 526 ntBASIC17.34■□□□□ 0.37
Clip4Q8CI96 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clip4Q8CI96 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clip4Q8CI96 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clip4Q8CI96 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clip4Q8CI96 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clip4Q8CI96 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clip4Q8CI96 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clip4Q8CI96 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Clip4Q8CI96 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.33■□□□□ 0.37
Clip4Q8CI96 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Gm10252-201ENSMUST00000209541 832 ntBASIC17.33■□□□□ 0.36
Clip4Q8CI96 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.33■□□□□ 0.36
Clip4Q8CI96 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clip4Q8CI96 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms