Protein–RNA interactions for Protein: Q8CFD4

Snx8, Sorting nexin-8, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx8Q8CFD4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Mir6349-201ENSMUST00000184059 97 ntBASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Gm8969-201ENSMUST00000199694 526 ntBASIC17.13■□□□□ 0.33
Snx8Q8CFD4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snx8Q8CFD4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx8Q8CFD4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Gm18666-201ENSMUST00000190039 958 ntBASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx8Q8CFD4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Snx8Q8CFD4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Gm5643-201ENSMUST00000117081 966 ntBASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Gm42545-201ENSMUST00000202755 922 ntBASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx8Q8CFD4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms