Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc28aQ8CEI3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc28aQ8CEI3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc28aQ8CEI3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc28aQ8CEI3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc28aQ8CEI3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Gm13216-201ENSMUST00000117145 591 ntBASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc28aQ8CEI3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc28aQ8CEI3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms