Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup88Q8CEC0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nup88Q8CEC0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Gm43183-201ENSMUST00000200632 547 ntBASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup88Q8CEC0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Gm21814-202ENSMUST00000203277 873 ntBASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup88Q8CEC0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup88Q8CEC0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup88Q8CEC0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nup88Q8CEC0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup88Q8CEC0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup88Q8CEC0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nup88Q8CEC0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup88Q8CEC0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Gm15375-201ENSMUST00000119510 849 ntBASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.32■□□□□ 0.84
Nup88Q8CEC0 Gm18025-201ENSMUST00000221733 862 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 166.2 ms