Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm5874-201ENSMUST00000096101 508 ntBASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd4Q8CC84 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Gm7291-201ENSMUST00000199147 382 ntBASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Gm42642-201ENSMUST00000200683 355 ntBASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd4Q8CC84 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd4Q8CC84 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd4Q8CC84 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Lysmd4Q8CC84 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lysmd4Q8CC84 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms