Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp1Q8C8C1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp1Q8C8C1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Gm2651-201ENSMUST00000203560 838 ntBASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtp1Q8C8C1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtp1Q8C8C1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rtp1Q8C8C1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Rtp1Q8C8C1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rtp1Q8C8C1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rtp1Q8C8C1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Rtp1Q8C8C1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtp1Q8C8C1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtp1Q8C8C1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtp1Q8C8C1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms