Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx6Q8C7R7 Gm8495-201ENSMUST00000188740 694 ntBASIC17.58■□□□□ 0.4
Rfx6Q8C7R7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx6Q8C7R7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx6Q8C7R7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx6Q8C7R7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Gm13401-201ENSMUST00000117074 291 ntBASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx6Q8C7R7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Mir5133-201ENSMUST00000174955 77 ntBASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx6Q8C7R7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Mtag2-201ENSMUST00000058665 714 ntBASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx6Q8C7R7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rfx6Q8C7R7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx6Q8C7R7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx6Q8C7R7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms