Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC23.28■■□□□ 1.32
Cps1Q8C196 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 AC153794.1-201ENSMUST00000169148 126 ntBASIC23.28■■□□□ 1.32
Cps1Q8C196 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Cps1Q8C196 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Cps1Q8C196 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Gm9449-201ENSMUST00000207265 1011 ntBASIC23.28■■□□□ 1.32
Cps1Q8C196 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC23.28■■□□□ 1.32
Cps1Q8C196 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cps1Q8C196 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cps1Q8C196 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cps1Q8C196 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cps1Q8C196 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cps1Q8C196 Gm27525-201ENSMUST00000184465 107 ntBASIC23.27■■□□□ 1.32
Cps1Q8C196 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cps1Q8C196 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC23.27■■□□□ 1.32
Cps1Q8C196 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cps1Q8C196 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC23.27■■□□□ 1.32
Cps1Q8C196 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Cps1Q8C196 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Cps1Q8C196 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cps1Q8C196 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC23.26■■□□□ 1.31
Cps1Q8C196 Gm11452-201ENSMUST00000122376 690 ntBASIC23.26■■□□□ 1.31
Cps1Q8C196 Gm29707-201ENSMUST00000196325 491 ntBASIC23.26■■□□□ 1.31
Cps1Q8C196 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC23.26■■□□□ 1.31
Cps1Q8C196 Gm5867-201ENSMUST00000063197 592 ntBASIC23.26■■□□□ 1.31
Cps1Q8C196 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC23.26■■□□□ 1.31
Cps1Q8C196 Wnt10b-204ENSMUST00000226655 1807 ntBASIC23.26■■□□□ 1.31
Cps1Q8C196 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC23.26■■□□□ 1.31
Cps1Q8C196 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cps1Q8C196 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cps1Q8C196 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cps1Q8C196 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cps1Q8C196 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cps1Q8C196 Rprl3-201ENSMUST00000157400 290 ntBASIC23.25■■□□□ 1.31
Cps1Q8C196 Gm2651-201ENSMUST00000203560 838 ntBASIC23.25■■□□□ 1.31
Cps1Q8C196 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cps1Q8C196 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC23.25■■□□□ 1.31
Cps1Q8C196 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cps1Q8C196 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cps1Q8C196 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cps1Q8C196 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC23.25■■□□□ 1.31
Cps1Q8C196 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC23.24■■□□□ 1.31
Cps1Q8C196 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Gm38342-201ENSMUST00000195710 2980 ntBASIC23.24■■□□□ 1.31
Cps1Q8C196 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Cps1Q8C196 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cps1Q8C196 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC23.23■■□□□ 1.31
Cps1Q8C196 Cmtm5-203ENSMUST00000227441 610 ntBASIC23.23■■□□□ 1.31
Cps1Q8C196 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC23.23■■□□□ 1.31
Cps1Q8C196 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Gm25925-201ENSMUST00000158314 306 ntBASIC23.23■■□□□ 1.31
Cps1Q8C196 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC23.23■■□□□ 1.31
Cps1Q8C196 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cps1Q8C196 AC125311.2-201ENSMUST00000227477 1940 ntBASIC23.22■■□□□ 1.31
Cps1Q8C196 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Cps1Q8C196 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC23.22■■□□□ 1.31
Cps1Q8C196 Gm18195-201ENSMUST00000207604 706 ntBASIC23.22■■□□□ 1.31
Cps1Q8C196 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC23.22■■□□□ 1.31
Cps1Q8C196 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cps1Q8C196 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms