Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne1Q8C166 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cpne1Q8C166 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.14■□□□□ 0.18
Cpne1Q8C166 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Gm715-201ENSMUST00000117865 831 ntBASIC16.14■□□□□ 0.17
Cpne1Q8C166 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne1Q8C166 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.13■□□□□ 0.17
Cpne1Q8C166 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne1Q8C166 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.12■□□□□ 0.17
Cpne1Q8C166 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.12■□□□□ 0.17
Cpne1Q8C166 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne1Q8C166 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cpne1Q8C166 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.1■□□□□ 0.17
Cpne1Q8C166 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.1■□□□□ 0.17
Cpne1Q8C166 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.1■□□□□ 0.17
Cpne1Q8C166 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cpne1Q8C166 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne1Q8C166 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.09■□□□□ 0.17
Cpne1Q8C166 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne1Q8C166 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne1Q8C166 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.09■□□□□ 0.17
Cpne1Q8C166 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.09■□□□□ 0.17
Cpne1Q8C166 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms