Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Gm4974-201ENSMUST00000209974 875 ntBASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sh3rf3Q8C120 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sh3rf3Q8C120 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf3Q8C120 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Gm22240-201ENSMUST00000175225 82 ntBASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf3Q8C120 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Mir1199-201ENSMUST00000117015 119 ntBASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3rf3Q8C120 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms