Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.39■□□□□ 0.21
Cdk5rap1Q8BTW8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap1Q8BTW8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm22697-201ENSMUST00000175194 63 ntBASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdk5rap1Q8BTW8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdk5rap1Q8BTW8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm7370-201ENSMUST00000219471 767 ntBASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdk5rap1Q8BTW8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Cdk5rap1Q8BTW8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms