Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smco3Q8BQM7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Smco3Q8BQM7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Smco3Q8BQM7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco3Q8BQM7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco3Q8BQM7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco3Q8BQM7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms