Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ckap4Q8BMK4 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ckap4Q8BMK4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ckap4Q8BMK4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ckap4Q8BMK4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ckap4Q8BMK4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ckap4Q8BMK4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Gm2559-201ENSMUST00000201323 363 ntBASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ckap4Q8BMK4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms