Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Zfp783-201ENSMUST00000095946 670 ntBASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.85■□□□□ 0.29
Pcdh20Q8BIZ0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Idnk-204ENSMUST00000226010 1898 ntBASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh20Q8BIZ0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdh20Q8BIZ0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Pcdh20Q8BIZ0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh20Q8BIZ0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh20Q8BIZ0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh20Q8BIZ0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh20Q8BIZ0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh20Q8BIZ0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh20Q8BIZ0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Gm38285-201ENSMUST00000192928 922 ntBASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh20Q8BIZ0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh20Q8BIZ0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms