Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn3Q8BHH8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clrn3Q8BHH8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Gm13168-201ENSMUST00000121771 632 ntBASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn3Q8BHH8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn3Q8BHH8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Gm12382-201ENSMUST00000122005 922 ntBASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn3Q8BHH8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms