Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Gm7862-201ENSMUST00000121461 292 ntBASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Auts2-212ENSMUST00000178555 309 ntBASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Gm27867-201ENSMUST00000184778 125 ntBASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc18Q80WC3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnrc18Q80WC3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Gm6736-201ENSMUST00000166583 948 ntBASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Gm2756-201ENSMUST00000195851 400 ntBASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc18Q80WC3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Gm4995-201ENSMUST00000117247 432 ntBASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tnrc18Q80WC3 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Gm11779-201ENSMUST00000118541 368 ntBASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc18Q80WC3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Gm8000-201ENSMUST00000188378 592 ntBASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc18Q80WC3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc18Q80WC3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tnrc18Q80WC3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc18Q80WC3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms