Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.22■□□□□ 0.35
Rpp38Q80UU2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp38Q80UU2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp38Q80UU2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpp38Q80UU2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpp38Q80UU2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpp38Q80UU2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Rpp38Q80UU2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpp38Q80UU2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpp38Q80UU2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms