Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Pcdh19Q80TF3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh19Q80TF3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh19Q80TF3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Mir8112-201ENSMUST00000184382 131 ntBASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Pcdh19Q80TF3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Gm17661-201ENSMUST00000170317 270 ntBASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh19Q80TF3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh19Q80TF3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh19Q80TF3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms