Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ush1gQ80T11 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ush1gQ80T11 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ush1gQ80T11 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.87■□□□□ 0.61
Ush1gQ80T11 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.86■□□□□ 0.61
Ush1gQ80T11 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Ush1gQ80T11 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Gm7638-201ENSMUST00000121348 967 ntBASIC18.85■□□□□ 0.61
Ush1gQ80T11 Gm9013-201ENSMUST00000132939 882 ntBASIC18.85■□□□□ 0.61
Ush1gQ80T11 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Gm5587-201ENSMUST00000206270 674 ntBASIC18.85■□□□□ 0.61
Ush1gQ80T11 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Ush1gQ80T11 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Gm21559-201ENSMUST00000220638 855 ntBASIC18.85■□□□□ 0.61
Ush1gQ80T11 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Gm8587-201ENSMUST00000076538 843 ntBASIC18.85■□□□□ 0.61
Ush1gQ80T11 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ush1gQ80T11 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ush1gQ80T11 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.84■□□□□ 0.61
Ush1gQ80T11 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.84■□□□□ 0.61
Ush1gQ80T11 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms