Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn10aQ6QIY3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn10aQ6QIY3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn10aQ6QIY3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Mir5131-201ENSMUST00000175426 93 ntBASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn10aQ6QIY3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Gm29707-201ENSMUST00000196325 491 ntBASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn10aQ6QIY3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Gm27867-201ENSMUST00000184778 125 ntBASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn10aQ6QIY3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn10aQ6QIY3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm6296-201ENSMUST00000222599 943 ntBASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm12350-201ENSMUST00000121208 462 ntBASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn10aQ6QIY3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms