Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rif1Q6PR54 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Gm12260-201ENSMUST00000122447 411 ntBASIC14.53□□□□□ -0.08
Rif1Q6PR54 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.53□□□□□ -0.08
Rif1Q6PR54 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.53□□□□□ -0.08
Rif1Q6PR54 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rif1Q6PR54 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rif1Q6PR54 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rif1Q6PR54 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.51□□□□□ -0.09
Rif1Q6PR54 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.51□□□□□ -0.09
Rif1Q6PR54 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rif1Q6PR54 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rif1Q6PR54 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.49□□□□□ -0.09
Rif1Q6PR54 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms