Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rundc3bQ6PDC0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rundc3bQ6PDC0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.3■□□□□ 0.2
Rundc3bQ6PDC0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rundc3bQ6PDC0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rundc3bQ6PDC0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 Mir8112-201ENSMUST00000184382 131 ntBASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rundc3bQ6PDC0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.27■□□□□ 0.19
Rundc3bQ6PDC0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms