Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rtl3Q6P1Y1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtl3Q6P1Y1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtl3Q6P1Y1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.83■□□□□ 0.45
Rtl3Q6P1Y1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtl3Q6P1Y1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rtl3Q6P1Y1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rtl3Q6P1Y1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtl3Q6P1Y1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rtl3Q6P1Y1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtl3Q6P1Y1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Gm13559-201ENSMUST00000120476 863 ntBASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.82■□□□□ 0.44
Rtl3Q6P1Y1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtl3Q6P1Y1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms