Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Six3Q62233 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.88■□□□□ 0.29
Six3Q62233 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Six3Q62233 Gm13158-201ENSMUST00000122007 736 ntBASIC16.88■□□□□ 0.29
Six3Q62233 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.88■□□□□ 0.29
Six3Q62233 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Gm20049-201ENSMUST00000219950 730 ntBASIC16.88■□□□□ 0.29
Six3Q62233 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Six3Q62233 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.88■□□□□ 0.29
Six3Q62233 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six3Q62233 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.87■□□□□ 0.29
Six3Q62233 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.87■□□□□ 0.29
Six3Q62233 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Six3Q62233 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.87■□□□□ 0.29
Six3Q62233 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.87■□□□□ 0.29
Six3Q62233 Gm42545-201ENSMUST00000202755 922 ntBASIC16.87■□□□□ 0.29
Six3Q62233 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.87■□□□□ 0.29
Six3Q62233 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Six3Q62233 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Six3Q62233 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Six3Q62233 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.86■□□□□ 0.29
Six3Q62233 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Six3Q62233 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Six3Q62233 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six3Q62233 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six3Q62233 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six3Q62233 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.85■□□□□ 0.29
Six3Q62233 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six3Q62233 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six3Q62233 Gm18025-201ENSMUST00000221733 862 ntBASIC16.85■□□□□ 0.29
Six3Q62233 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Six3Q62233 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six3Q62233 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six3Q62233 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Six3Q62233 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Gm12441-201ENSMUST00000121806 588 ntBASIC16.84■□□□□ 0.29
Six3Q62233 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.84■□□□□ 0.29
Six3Q62233 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.84■□□□□ 0.29
Six3Q62233 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.84■□□□□ 0.29
Six3Q62233 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six3Q62233 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Six3Q62233 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six3Q62233 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six3Q62233 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms