Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ift88Q61371 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Ift88Q61371 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ift88Q61371 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ift88Q61371 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ift88Q61371 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Ift88Q61371 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Ift88Q61371 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ift88Q61371 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.12■□□□□ 0.65
Ift88Q61371 Gm8495-201ENSMUST00000188740 694 ntBASIC19.12■□□□□ 0.65
Ift88Q61371 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ift88Q61371 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ift88Q61371 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ift88Q61371 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ift88Q61371 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ift88Q61371 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ift88Q61371 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Gm27405-201ENSMUST00000184201 112 ntBASIC19.11■□□□□ 0.65
Ift88Q61371 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.11■□□□□ 0.65
Ift88Q61371 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ift88Q61371 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ift88Q61371 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ift88Q61371 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ift88Q61371 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.1■□□□□ 0.65
Ift88Q61371 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ift88Q61371 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ift88Q61371 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.1■□□□□ 0.65
Ift88Q61371 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.1■□□□□ 0.65
Ift88Q61371 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ift88Q61371 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ift88Q61371 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.1■□□□□ 0.65
Ift88Q61371 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ift88Q61371 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ift88Q61371 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ift88Q61371 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Haglr-201ENSMUST00000100000 2085 ntBASIC19.09■□□□□ 0.65
Ift88Q61371 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Gm10138-203ENSMUST00000206952 366 ntBASIC19.09■□□□□ 0.65
Ift88Q61371 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ift88Q61371 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ift88Q61371 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ift88Q61371 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.09■□□□□ 0.65
Ift88Q61371 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ift88Q61371 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ift88Q61371 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ift88Q61371 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ift88Q61371 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ift88Q61371 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ift88Q61371 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ift88Q61371 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Ift88Q61371 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Ift88Q61371 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.08■□□□□ 0.64
Ift88Q61371 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.08■□□□□ 0.64
Ift88Q61371 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ift88Q61371 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ift88Q61371 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ift88Q61371 Gm4968-201ENSMUST00000071458 858 ntBASIC19.08■□□□□ 0.64
Ift88Q61371 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ift88Q61371 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ift88Q61371 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ift88Q61371 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ift88Q61371 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ift88Q61371 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ift88Q61371 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.07■□□□□ 0.64
Ift88Q61371 Gm2559-201ENSMUST00000201323 363 ntBASIC19.07■□□□□ 0.64
Ift88Q61371 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms