Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.1■□□□□ 0.33
Col12a1Q60847 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col12a1Q60847 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col12a1Q60847 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col12a1Q60847 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.1■□□□□ 0.33
Col12a1Q60847 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.1■□□□□ 0.33
Col12a1Q60847 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col12a1Q60847 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.09■□□□□ 0.33
Col12a1Q60847 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.09■□□□□ 0.33
Col12a1Q60847 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col12a1Q60847 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col12a1Q60847 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Col12a1Q60847 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.09■□□□□ 0.33
Col12a1Q60847 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col12a1Q60847 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col12a1Q60847 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Col12a1Q60847 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.08■□□□□ 0.33
Col12a1Q60847 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col12a1Q60847 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Col12a1Q60847 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col12a1Q60847 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col12a1Q60847 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col12a1Q60847 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col12a1Q60847 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col12a1Q60847 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col12a1Q60847 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Col12a1Q60847 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col12a1Q60847 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col12a1Q60847 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col12a1Q60847 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.07■□□□□ 0.32
Col12a1Q60847 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.07■□□□□ 0.32
Col12a1Q60847 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.07■□□□□ 0.32
Col12a1Q60847 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.07■□□□□ 0.32
Col12a1Q60847 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.07■□□□□ 0.32
Col12a1Q60847 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.07■□□□□ 0.32
Col12a1Q60847 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.07■□□□□ 0.32
Col12a1Q60847 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.07■□□□□ 0.32
Col12a1Q60847 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Col12a1Q60847 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col12a1Q60847 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.06■□□□□ 0.32
Col12a1Q60847 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.06■□□□□ 0.32
Col12a1Q60847 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
Col12a1Q60847 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.06■□□□□ 0.32
Col12a1Q60847 Gm27321-201ENSMUST00000185021 205 ntBASIC17.06■□□□□ 0.32
Col12a1Q60847 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.06■□□□□ 0.32
Col12a1Q60847 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col12a1Q60847 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col12a1Q60847 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.05■□□□□ 0.32
Col12a1Q60847 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Col12a1Q60847 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col12a1Q60847 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col12a1Q60847 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col12a1Q60847 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col12a1Q60847 Gm9727-201ENSMUST00000161387 555 ntBASIC17.05■□□□□ 0.32
Col12a1Q60847 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col12a1Q60847 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col12a1Q60847 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col12a1Q60847 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.05■□□□□ 0.32
Col12a1Q60847 Chchd1-203ENSMUST00000224633 557 ntBASIC17.05■□□□□ 0.32
Col12a1Q60847 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col12a1Q60847 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.05■□□□□ 0.32
Col12a1Q60847 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.04■□□□□ 0.32
Col12a1Q60847 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.04■□□□□ 0.32
Col12a1Q60847 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms