Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21■□□□□ 0.95
Ubr3Q5U430 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21■□□□□ 0.95
Ubr3Q5U430 Gm13830-205ENSMUST00000201195 1155 ntBASIC21■□□□□ 0.95
Ubr3Q5U430 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21■□□□□ 0.95
Ubr3Q5U430 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubr3Q5U430 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubr3Q5U430 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.98■□□□□ 0.95
Ubr3Q5U430 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.98■□□□□ 0.95
Ubr3Q5U430 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.98■□□□□ 0.95
Ubr3Q5U430 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Gm15165-201ENSMUST00000118140 502 ntBASIC20.97■□□□□ 0.95
Ubr3Q5U430 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Gm6376-201ENSMUST00000209407 580 ntBASIC20.97■□□□□ 0.95
Ubr3Q5U430 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Gm5364-201ENSMUST00000216789 889 ntBASIC20.97■□□□□ 0.95
Ubr3Q5U430 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr3Q5U430 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.96■□□□□ 0.95
Ubr3Q5U430 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr3Q5U430 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Gm27702-201ENSMUST00000184512 56 ntBASIC20.95■□□□□ 0.94
Ubr3Q5U430 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr3Q5U430 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Gm7862-201ENSMUST00000121461 292 ntBASIC20.94■□□□□ 0.94
Ubr3Q5U430 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.94■□□□□ 0.94
Ubr3Q5U430 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Gm8000-201ENSMUST00000188378 592 ntBASIC20.94■□□□□ 0.94
Ubr3Q5U430 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr3Q5U430 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms