Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Gm20760-201ENSMUST00000179197 648 ntBASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Gm10517-202ENSMUST00000192970 758 ntBASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim38Q5SZ99 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim38Q5SZ99 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim38Q5SZ99 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim38Q5SZ99 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim38Q5SZ99 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim38Q5SZ99 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim38Q5SZ99 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.87■□□□□ 0.45
Trim38Q5SZ99 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.87■□□□□ 0.45
Trim38Q5SZ99 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Gm10653-202ENSMUST00000139570 835 ntBASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms