Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctc1Q5SUQ9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Gm15375-201ENSMUST00000119510 849 ntBASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ctc1Q5SUQ9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ctc1Q5SUQ9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ctc1Q5SUQ9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctc1Q5SUQ9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctc1Q5SUQ9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Gm13559-201ENSMUST00000120476 863 ntBASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Timm23-208ENSMUST00000226683 750 ntBASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ctc1Q5SUQ9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ctc1Q5SUQ9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms