Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm45417-201ENSMUST00000209533 758 ntBASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.46□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.44□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms