Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdv4Q5R1A3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Gm12382-201ENSMUST00000122005 922 ntBASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv4Q5R1A3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Gm43183-201ENSMUST00000200632 547 ntBASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv4Q5R1A3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Gm15378-201ENSMUST00000121894 207 ntBASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdv4Q5R1A3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv4Q5R1A3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms