Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Gm14494-201ENSMUST00000118786 435 ntBASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Gm10175-201ENSMUST00000086013 645 ntBASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps13aQ5H8C4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vps13aQ5H8C4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.14■□□□□ 0.33
Vps13aQ5H8C4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps13aQ5H8C4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps13aQ5H8C4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps13aQ5H8C4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vps13aQ5H8C4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps13aQ5H8C4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps13aQ5H8C4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Gm27321-201ENSMUST00000185021 205 ntBASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.12■□□□□ 0.33
Vps13aQ5H8C4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Gm24513-201ENSMUST00000174964 138 ntBASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Gm27867-201ENSMUST00000184778 125 ntBASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13aQ5H8C4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms