Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SfswapQ3USH5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SfswapQ3USH5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.57■□□□□ 0.88
SfswapQ3USH5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Gm7213-201ENSMUST00000215977 950 ntBASIC20.57■□□□□ 0.88
SfswapQ3USH5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SfswapQ3USH5 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.57■□□□□ 0.88
SfswapQ3USH5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Gm21559-201ENSMUST00000220638 855 ntBASIC20.56■□□□□ 0.88
SfswapQ3USH5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SfswapQ3USH5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Gm8587-201ENSMUST00000076538 843 ntBASIC20.56■□□□□ 0.88
SfswapQ3USH5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SfswapQ3USH5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.55■□□□□ 0.88
SfswapQ3USH5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SfswapQ3USH5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Gm27389-201ENSMUST00000183622 195 ntBASIC20.54■□□□□ 0.88
SfswapQ3USH5 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.54■□□□□ 0.88
SfswapQ3USH5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SfswapQ3USH5 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.54■□□□□ 0.88
SfswapQ3USH5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SfswapQ3USH5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Mir1668-201ENSMUST00000184114 107 ntBASIC20.52■□□□□ 0.88
SfswapQ3USH5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.52■□□□□ 0.88
SfswapQ3USH5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms