Protein–RNA interactions for Protein: Q3UHU5

Mtcl1, Microtubule cross-linking factor 1, mousemouse

Predictions only

Length 1,945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtcl1Q3UHU5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mtcl1Q3UHU5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mtcl1Q3UHU5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Gm13186-201ENSMUST00000118031 316 ntBASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mtcl1Q3UHU5 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Mir5131-201ENSMUST00000175426 93 ntBASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mtcl1Q3UHU5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mtcl1Q3UHU5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Gm37935-201ENSMUST00000192012 982 ntBASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Gm11594-201ENSMUST00000122313 162 ntBASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mtcl1Q3UHU5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Mtcl1Q3UHU5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mtcl1Q3UHU5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms