Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Treml4Q3LRV9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Treml4Q3LRV9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Treml4Q3LRV9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Treml4Q3LRV9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Treml4Q3LRV9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Gm17807-201ENSMUST00000186869 298 ntBASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.15■□□□□ 0.18
Treml4Q3LRV9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Gm7153-201ENSMUST00000117092 455 ntBASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Gm18669-201ENSMUST00000216049 778 ntBASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Treml4Q3LRV9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Treml4Q3LRV9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms