Protein–RNA interactions for Protein: Q30KP6

Defb41, Beta-defensin 41, mousemouse

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb41Q30KP6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Defb41Q30KP6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.11■□□□□ 0.17
Defb41Q30KP6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Defb41Q30KP6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Gm13559-201ENSMUST00000120476 863 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Gm7889-201ENSMUST00000185591 958 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Gm9731-201ENSMUST00000209480 747 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Rarb-207ENSMUST00000225921 2756 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.1■□□□□ 0.17
Defb41Q30KP6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Defb41Q30KP6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Gm7791-201ENSMUST00000219066 539 ntBASIC16.09■□□□□ 0.17
Defb41Q30KP6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb41Q30KP6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Defb41Q30KP6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.08■□□□□ 0.17
Defb41Q30KP6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Defb41Q30KP6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Defb41Q30KP6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.08■□□□□ 0.17
Defb41Q30KP6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Defb41Q30KP6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Defb41Q30KP6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.08■□□□□ 0.16
Defb41Q30KP6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.08■□□□□ 0.16
Defb41Q30KP6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.08■□□□□ 0.16
Defb41Q30KP6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Defb41Q30KP6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Defb41Q30KP6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Defb41Q30KP6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.07■□□□□ 0.16
Defb41Q30KP6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.07■□□□□ 0.16
Defb41Q30KP6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb41Q30KP6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms