Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tff1Q08423 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tff1Q08423 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tff1Q08423 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tff1Q08423 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.34□□□□□ -0.11
Tff1Q08423 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.34□□□□□ -0.11
Tff1Q08423 Gm6576-201ENSMUST00000169678 883 ntBASIC14.34□□□□□ -0.11
Tff1Q08423 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tff1Q08423 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tff1Q08423 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tff1Q08423 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tff1Q08423 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff1Q08423 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tff1Q08423 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tff1Q08423 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tff1Q08423 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tff1Q08423 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tff1Q08423 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Tff1Q08423 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.33□□□□□ -0.12
Tff1Q08423 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.33□□□□□ -0.12
Tff1Q08423 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Tff1Q08423 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff1Q08423 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tff1Q08423 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Tff1Q08423 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.32□□□□□ -0.12
Tff1Q08423 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.32□□□□□ -0.12
Tff1Q08423 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.32□□□□□ -0.12
Tff1Q08423 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.32□□□□□ -0.12
Tff1Q08423 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Tff1Q08423 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.32□□□□□ -0.12
Tff1Q08423 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tff1Q08423 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tff1Q08423 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.32□□□□□ -0.12
Tff1Q08423 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.32□□□□□ -0.12
Tff1Q08423 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tff1Q08423 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.31□□□□□ -0.12
Tff1Q08423 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tff1Q08423 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms