Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Grk6-206ENSMUST00000224995 2971 ntBASIC15.88■□□□□ 0.13
Cacna1aP97445 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.88■□□□□ 0.13
Cacna1aP97445 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cacna1aP97445 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Cacna1aP97445 Gm43347-201ENSMUST00000200226 580 ntBASIC15.87■□□□□ 0.13
Cacna1aP97445 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.87■□□□□ 0.13
Cacna1aP97445 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Cacna1aP97445 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 BC021767-201ENSMUST00000126387 1716 ntBASIC15.87■□□□□ 0.13
Cacna1aP97445 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1aP97445 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cacna1aP97445 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Cacna1aP97445 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Auts2-212ENSMUST00000178555 309 ntBASIC15.86■□□□□ 0.13
Cacna1aP97445 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.86■□□□□ 0.13
Cacna1aP97445 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Gm45328-201ENSMUST00000210942 917 ntBASIC15.86■□□□□ 0.13
Cacna1aP97445 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.86■□□□□ 0.13
Cacna1aP97445 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1aP97445 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cacna1aP97445 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cacna1aP97445 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cacna1aP97445 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Gm2651-201ENSMUST00000203560 838 ntBASIC15.85■□□□□ 0.13
Cacna1aP97445 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1aP97445 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Gm27702-201ENSMUST00000184512 56 ntBASIC15.84■□□□□ 0.13
Cacna1aP97445 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1aP97445 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1aP97445 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms