Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.15■□□□□ 0.18
Six5P70178 Timm23-208ENSMUST00000226683 750 ntBASIC16.15■□□□□ 0.18
Six5P70178 Odf3b-204ENSMUST00000227834 930 ntBASIC16.15■□□□□ 0.18
Six5P70178 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Six5P70178 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Six5P70178 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Six5P70178 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.15■□□□□ 0.18
Six5P70178 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Six5P70178 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Six5P70178 Gm715-201ENSMUST00000117865 831 ntBASIC16.14■□□□□ 0.17
Six5P70178 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.14■□□□□ 0.17
Six5P70178 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six5P70178 Gm37025-201ENSMUST00000195159 829 ntBASIC16.14■□□□□ 0.17
Six5P70178 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.14■□□□□ 0.17
Six5P70178 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six5P70178 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.14■□□□□ 0.17
Six5P70178 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six5P70178 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six5P70178 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six5P70178 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Six5P70178 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Six5P70178 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.14■□□□□ 0.17
Six5P70178 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six5P70178 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.13■□□□□ 0.17
Six5P70178 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Six5P70178 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.13■□□□□ 0.17
Six5P70178 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.13■□□□□ 0.17
Six5P70178 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.13■□□□□ 0.17
Six5P70178 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.13■□□□□ 0.17
Six5P70178 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Six5P70178 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six5P70178 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.12■□□□□ 0.17
Six5P70178 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.12■□□□□ 0.17
Six5P70178 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.12■□□□□ 0.17
Six5P70178 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.12■□□□□ 0.17
Six5P70178 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.12■□□□□ 0.17
Six5P70178 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Six5P70178 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Six5P70178 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Six5P70178 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six5P70178 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Six5P70178 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.12■□□□□ 0.17
Six5P70178 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.11■□□□□ 0.17
Six5P70178 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.11■□□□□ 0.17
Six5P70178 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Six5P70178 Gm17661-201ENSMUST00000170317 270 ntBASIC16.11■□□□□ 0.17
Six5P70178 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.11■□□□□ 0.17
Six5P70178 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms