Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm3P62311 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Lsm3P62311 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm3P62311 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm3P62311 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lsm3P62311 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Lsm3P62311 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.84■□□□□ 0.13
Lsm3P62311 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lsm3P62311 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lsm3P62311 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Lsm3P62311 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Lsm3P62311 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lsm3P62311 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lsm3P62311 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.83■□□□□ 0.12
Lsm3P62311 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lsm3P62311 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm3P62311 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lsm3P62311 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lsm3P62311 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm3P62311 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm3P62311 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm3P62311 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm3P62311 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm3P62311 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.82■□□□□ 0.12
Lsm3P62311 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.82■□□□□ 0.12
Lsm3P62311 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.82■□□□□ 0.12
Lsm3P62311 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.82■□□□□ 0.12
Lsm3P62311 Gm27801-201ENSMUST00000184174 223 ntBASIC15.82■□□□□ 0.12
Lsm3P62311 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.82■□□□□ 0.12
Lsm3P62311 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lsm3P62311 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lsm3P62311 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Lsm3P62311 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.82■□□□□ 0.12
Lsm3P62311 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lsm3P62311 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.82■□□□□ 0.12
Lsm3P62311 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm3P62311 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Lsm3P62311 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Lsm3P62311 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lsm3P62311 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Lsm3P62311 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Gm11421-201ENSMUST00000122124 294 ntBASIC15.81■□□□□ 0.12
Lsm3P62311 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.81■□□□□ 0.12
Lsm3P62311 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.81■□□□□ 0.12
Lsm3P62311 Gm38205-201ENSMUST00000192243 258 ntBASIC15.81■□□□□ 0.12
Lsm3P62311 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm3P62311 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lsm3P62311 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Lsm3P62311 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lsm3P62311 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lsm3P62311 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.8■□□□□ 0.12
Lsm3P62311 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.8■□□□□ 0.12
Lsm3P62311 Golgb1-201ENSMUST00000023534 498 ntBASIC15.8■□□□□ 0.12
Lsm3P62311 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm3P62311 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm3P62311 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.8■□□□□ 0.12
Lsm3P62311 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms