Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sssca1P56873 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sssca1P56873 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.97□□□□□ -0.17
Sssca1P56873 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.97□□□□□ -0.17
Sssca1P56873 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.97□□□□□ -0.17
Sssca1P56873 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.96□□□□□ -0.17
Sssca1P56873 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Gm2399-201ENSMUST00000104944 225 ntBASIC13.96□□□□□ -0.17
Sssca1P56873 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.96□□□□□ -0.17
Sssca1P56873 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.96□□□□□ -0.17
Sssca1P56873 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sssca1P56873 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Sssca1P56873 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.96□□□□□ -0.17
Sssca1P56873 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.96□□□□□ -0.17
Sssca1P56873 Gm42642-201ENSMUST00000200683 355 ntBASIC13.96□□□□□ -0.17
Sssca1P56873 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.96□□□□□ -0.17
Sssca1P56873 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Gm6365-201ENSMUST00000054711 744 ntBASIC13.96□□□□□ -0.17
Sssca1P56873 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sssca1P56873 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sssca1P56873 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.96□□□□□ -0.17
Sssca1P56873 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.96□□□□□ -0.18
Sssca1P56873 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sssca1P56873 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sssca1P56873 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Sssca1P56873 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sssca1P56873 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sssca1P56873 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sssca1P56873 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Sssca1P56873 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Sssca1P56873 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.95□□□□□ -0.18
Sssca1P56873 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.95□□□□□ -0.18
Sssca1P56873 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sssca1P56873 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.95□□□□□ -0.18
Sssca1P56873 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sssca1P56873 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.95□□□□□ -0.18
Sssca1P56873 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sssca1P56873 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sssca1P56873 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sssca1P56873 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Sssca1P56873 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sssca1P56873 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.94□□□□□ -0.18
Sssca1P56873 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sssca1P56873 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sssca1P56873 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms