Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.32■□□□□ 0.2
RoraP51448 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.32■□□□□ 0.2
RoraP51448 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RoraP51448 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RoraP51448 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RoraP51448 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Idnk-204ENSMUST00000226010 1898 ntBASIC16.31■□□□□ 0.2
RoraP51448 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RoraP51448 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RoraP51448 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RoraP51448 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Mir5130-201ENSMUST00000175160 84 ntBASIC16.31■□□□□ 0.2
RoraP51448 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.31■□□□□ 0.2
RoraP51448 Gm7791-201ENSMUST00000219066 539 ntBASIC16.31■□□□□ 0.2
RoraP51448 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Grk6-206ENSMUST00000224995 2971 ntBASIC16.31■□□□□ 0.2
RoraP51448 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.31■□□□□ 0.2
RoraP51448 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.31■□□□□ 0.2
RoraP51448 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RoraP51448 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.3■□□□□ 0.2
RoraP51448 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.3■□□□□ 0.2
RoraP51448 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.3■□□□□ 0.2
RoraP51448 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.3■□□□□ 0.2
RoraP51448 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.3■□□□□ 0.2
RoraP51448 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RoraP51448 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RoraP51448 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RoraP51448 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RoraP51448 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RoraP51448 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.29■□□□□ 0.2
RoraP51448 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RoraP51448 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.29■□□□□ 0.2
RoraP51448 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RoraP51448 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.28■□□□□ 0.2
RoraP51448 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Gm10013-201ENSMUST00000106074 672 ntBASIC16.28■□□□□ 0.2
RoraP51448 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.28■□□□□ 0.2
RoraP51448 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RoraP51448 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.28■□□□□ 0.2
RoraP51448 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RoraP51448 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RoraP51448 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.27■□□□□ 0.2
RoraP51448 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RoraP51448 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RoraP51448 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RoraP51448 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RoraP51448 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms