Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc2P43407 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sdc2P43407 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.39■□□□□ 0.69
Sdc2P43407 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc2P43407 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc2P43407 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sdc2P43407 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sdc2P43407 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.38■□□□□ 0.69
Sdc2P43407 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.38■□□□□ 0.69
Sdc2P43407 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sdc2P43407 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc2P43407 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sdc2P43407 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Sdc2P43407 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sdc2P43407 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.37■□□□□ 0.69
Sdc2P43407 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.37■□□□□ 0.69
Sdc2P43407 Gm6576-201ENSMUST00000169678 883 ntBASIC19.37■□□□□ 0.69
Sdc2P43407 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sdc2P43407 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.37■□□□□ 0.69
Sdc2P43407 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sdc2P43407 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdc2P43407 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sdc2P43407 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sdc2P43407 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sdc2P43407 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.36■□□□□ 0.69
Sdc2P43407 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sdc2P43407 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sdc2P43407 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sdc2P43407 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc2P43407 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Sdc2P43407 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.35■□□□□ 0.69
Sdc2P43407 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.35■□□□□ 0.69
Sdc2P43407 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sdc2P43407 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc2P43407 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sdc2P43407 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sdc2P43407 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.34■□□□□ 0.69
Sdc2P43407 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sdc2P43407 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Sdc2P43407 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Sdc2P43407 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sdc2P43407 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sdc2P43407 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.34■□□□□ 0.69
Sdc2P43407 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Sdc2P43407 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc2P43407 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sdc2P43407 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc2P43407 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc2P43407 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc2P43407 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sdc2P43407 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc2P43407 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc2P43407 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc2P43407 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc2P43407 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sdc2P43407 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.33■□□□□ 0.68
Sdc2P43407 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc2P43407 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc2P43407 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc2P43407 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms