Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.52■□□□□ 0.24
Cdh4P39038 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cdh4P39038 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh4P39038 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh4P39038 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cdh4P39038 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh4P39038 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh4P39038 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh4P39038 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.51■□□□□ 0.23
Cdh4P39038 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.51■□□□□ 0.23
Cdh4P39038 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdh4P39038 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.51■□□□□ 0.23
Cdh4P39038 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Gm3375-201ENSMUST00000203929 796 ntBASIC16.51■□□□□ 0.23
Cdh4P39038 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdh4P39038 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh4P39038 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdh4P39038 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdh4P39038 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Cdh4P39038 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.5■□□□□ 0.23
Cdh4P39038 Gm38027-201ENSMUST00000192315 235 ntBASIC16.5■□□□□ 0.23
Cdh4P39038 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdh4P39038 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.5■□□□□ 0.23
Cdh4P39038 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdh4P39038 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Cdh4P39038 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh4P39038 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdh4P39038 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Gm8969-201ENSMUST00000199694 526 ntBASIC16.49■□□□□ 0.23
Cdh4P39038 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.49■□□□□ 0.23
Cdh4P39038 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.49■□□□□ 0.23
Cdh4P39038 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.49■□□□□ 0.23
Cdh4P39038 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh4P39038 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cdh4P39038 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdh4P39038 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdh4P39038 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdh4P39038 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdh4P39038 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cdh4P39038 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh4P39038 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdh4P39038 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh4P39038 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Cdh4P39038 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh4P39038 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh4P39038 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh4P39038 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh4P39038 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.47■□□□□ 0.23
Cdh4P39038 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms