Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab5cP35278 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab5cP35278 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.14□□□□□ -0.15
Rab5cP35278 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab5cP35278 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.14□□□□□ -0.15
Rab5cP35278 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.13□□□□□ -0.15
Rab5cP35278 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rab5cP35278 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab5cP35278 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab5cP35278 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab5cP35278 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.13□□□□□ -0.15
Rab5cP35278 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rab5cP35278 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab5cP35278 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab5cP35278 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.12□□□□□ -0.15
Rab5cP35278 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rab5cP35278 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.12□□□□□ -0.15
Rab5cP35278 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab5cP35278 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.11□□□□□ -0.15
Rab5cP35278 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.11□□□□□ -0.15
Rab5cP35278 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rab5cP35278 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rab5cP35278 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rab5cP35278 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rab5cP35278 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rab5cP35278 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab5cP35278 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rab5cP35278 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rab5cP35278 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rab5cP35278 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.1□□□□□ -0.15
Rab5cP35278 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rab5cP35278 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rab5cP35278 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab5cP35278 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms