Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a11P31650 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a11P31650 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Slc6a11P31650 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.4■□□□□ 0.22
Slc6a11P31650 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Slc6a11P31650 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc6a11P31650 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Slc6a11P31650 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Slc6a11P31650 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc6a11P31650 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc6a11P31650 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc6a11P31650 Gm18666-201ENSMUST00000190039 958 ntBASIC16.39■□□□□ 0.21
Slc6a11P31650 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a11P31650 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a11P31650 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a11P31650 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a11P31650 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a11P31650 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.38■□□□□ 0.21
Slc6a11P31650 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Slc6a11P31650 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Slc6a11P31650 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a11P31650 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Slc6a11P31650 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.38■□□□□ 0.21
Slc6a11P31650 Mir8112-201ENSMUST00000184382 131 ntBASIC16.38■□□□□ 0.21
Slc6a11P31650 Gm29791-202ENSMUST00000207888 369 ntBASIC16.38■□□□□ 0.21
Slc6a11P31650 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.38■□□□□ 0.21
Slc6a11P31650 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a11P31650 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a11P31650 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.38■□□□□ 0.21
Slc6a11P31650 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a11P31650 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.37■□□□□ 0.21
Slc6a11P31650 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.37■□□□□ 0.21
Slc6a11P31650 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.37■□□□□ 0.21
Slc6a11P31650 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a11P31650 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Slc6a11P31650 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a11P31650 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Gm38285-201ENSMUST00000192928 922 ntBASIC16.37■□□□□ 0.21
Slc6a11P31650 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a11P31650 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Slc6a11P31650 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.36■□□□□ 0.21
Slc6a11P31650 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.36■□□□□ 0.21
Slc6a11P31650 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.36■□□□□ 0.21
Slc6a11P31650 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Slc6a11P31650 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.36■□□□□ 0.21
Slc6a11P31650 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.36■□□□□ 0.21
Slc6a11P31650 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a11P31650 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a11P31650 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Slc6a11P31650 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a11P31650 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms